Signature	SharedGeneNum	SharedGenes	AvgPval	ColonC_M2 Chr17q11-12,21-25_UniqueNum	ColonC_M2 Chr17q11-12,21-25_pVal	ColonC_M2 Chr17q11-12,21-25_Unique	ColonC_M29 Chr8q_UniqueNum	ColonC_M29 Chr8q_pVal	ColonC_M29 Chr8q_Unique
AGUIRRE_PANCREATIC_CANCER_COPY_NUMBER_UP	0		7.14875927607e-15	38	9.47364177795e-23	AARSD1|ACLY|ANKRD40|BECN1|CASKIN2|CBX1|CDC27|COA3|COX11|G6PC3|GIPR|GPATCH8|KPNB1|KRT10|LRRC59|MLX|NBR1|NKIRAS2|NME1|NMT1|NPEPPS|NSF|PHB|PNPO|PSME3|RETREG3|RSAD1|SLC35B1|SMARCE1|SNF8|SNX11|SPAG9|SPOP|STAT5B|TMUB2|UBE2Z|UTP18|ZNF652	27	1.42975184574e-14	CYC1|CYHR1|DERL1|DGAT1|EEF1D|EXOSC4|FAM49B|GPAA1|GSDMD|HGH1|MRPL13|OPLAH|PHF20L1|PTK2|RNF139|SCRIB|SHARPIN|SLC39A4|SLC52A2|TAF2|TBC1D31|THEM6|TSTA3|VPS28|WDYHV1|ZC3H3|ZNF623
BOYAULT_LIVER_CANCER_SUBCLASS_G3_UP	0		2.81730222646e-07	26	1.54011609537e-16	ACACA|CANT1|CASC3|CDC6|COIL|CSNK1D|EIF4A3|HGS|KPNB1|LRRC59|MED1|MMD|NLE1|NME1|NOL11|NPEPPS|NSF|PFN2|PHB|PRKAR1A|PSMD11|PSME3|SAP30BP|SMG8|UTP18|WDR45B	14	5.63460445137e-07	BOP1|COPS5|EIF3H|ELOC|PLEKHF2|POLR2K|RAD21|RPL8|SLC52A2|TAF2|TPD52|UBE2V2|UBR5|WDYHV1
CAIRO_HEPATOBLASTOMA_CLASSES_UP	0		1.59110896961e-12	38	3.11338796006e-12	AARSD1|AATF|ACLY|AP2B1|BIRC5|BLMH|CCDC47|CDC6|CDC27|CIAO1|COIL|DNAJC7|EIF4A3|GPS1|KPNB1|LIG3|LRRC59|MRPL12|MRPS7|NLE1|NME1|NOL11|NUP85|PHB|RPL23|RPS6KB1|SEPT9|SPAG5|SRSF1|SUPT4H1|TEX2|TMEM97|TOP2A|TUBG1|UTP6|UTP18|ZNF207|ZNHIT3	37	6.88299791531e-14	ARFGEF1|ATP6V1H|BOP1|C6ORF48|C8ORF33|CHD7|COPS5|CYC1|E2F5|EEF1D|EIF3E|EIF3H|ENY2|EXOSC4|GINS4|HSF1|LAPTM4B|MCM4|MRPL15|MTDH|PABPC4|PRKDC|PTDSS1|PTK2|PUF60|RB1CC1|RPL8|RRS1|SCRIB|SLC39A4|TBC1D31|TCEA1|TGS1|UQCRB|WDYHV1|YWHAZ|ZNF696
Human Breast_Desmedt08_229genes_AURKA_Module (18698033-tableS1-AURKA)	0		0.000353426546285	13	0.000175772728352	ATAD5|BIRC5|CDC6|CENPX|COIL|EIF4A3|LRRC59|MRPL58|SPAG5|TACO1|TK1|TUBG1|WDR45B	11	0.000531080364218	AZIN1|ESRP1|EXOSC4|HSF1|LACTB2|LAPTM4B|PUF60|RRS1|SLC39A4|ZNF250|ZNF706
Human Breast_HaibeKains10_229genes_GENIUS_ERposHER2neg (20156340-GENIUS-ERposHER2neg_signature)	0		0.000353426546285	13	0.000175772728352	ATAD5|BIRC5|CDC6|CENPX|COIL|EIF4A3|LRRC59|MRPL58|SPAG5|TACO1|TK1|TUBG1|WDR45B	11	0.000531080364218	AZIN1|ESRP1|EXOSC4|HSF1|LACTB2|LAPTM4B|PUF60|RRS1|SLC39A4|ZNF250|ZNF706
Human Breast_Horlings10_271genes (20068109-SuppTable3)	0		1.38209361639e-21	34	2.76418723278e-21	AMZ2|BIRC5|CASKIN2|COG1|EXOC7|GGA3|GRB2|JMJD6|KCTD2|METTL23|MRPL38|MRPL58|MRPS7|NAT9|NOL11|NT5C|PGS1|PRKAR1A|PRPSAP1|PSMD12|RAD51C|SAP30BP|SEPT9|SLC9A3R1|SLC25A19|SLC39A11|SRP68|SUMO2|SYNGR2|TK1|TMC6|TMEM104|TSEN54|USP36	48	1.08889604242e-40	ATAD2|ATP6V1C1|CCNE2|COX6C|DCAF13|DEPTOR|EBAG9|EFR3A|EIF3E|EIF3H|EMC2|ENY2|EXT1|FAM84B|FZD6|GRHL2|LAPTM4B|MRPL13|MTDH|MTERF3|NDUFB9|NUDCD1|PABPC1|PDP1|PHF20L1|PLEKHF2|POLR2K|PTDSS1|RAD21|RBM12B|RIDA|RNF19A|RNF139|RPL30|RRM2B|STK3|SYBU|TATDN1|TRMT12|UBR5|UQCRB|UTP23|VIRMA|VPS13B|WDYHV1|YWHAZ|ZHX1|ZNF706
Human Breast_Turner10_324genes (20101236-SuppTable7a)	0		9.95055550965e-05	27	2.93988617866e-13	ACACA|BIRC5|DDX52|DUS1L|EIF4A3|FAM104A|FN3KRP|GPS1|MAFG|MRPL38|MRPL45|MRPL58|NARF|NUP85|PEX12|PGS1|PSMB3|PSMD3|RMND5B|RPL23|SAP30BP|SLC39A11|SRP68|SUMO2|TBCD|TRIM37|TUBD1	13	0.000199011109899	CHMP4C|COPB1|INTS8|PHF20L1|PTK2|RAD21|RPL7|SPIDR|UBR5|UTP23|VIRMA|ZNF7|ZNF706
Human Viral_Cairo08_982genes (19061838-TableS7)	0		8.13346453154e-09	38	1.62361331248e-08	AARSD1|AATF|ACLY|AP2B1|BIRC5|BLMH|CCDC47|CDC6|CDC27|CIAO1|COIL|DNAJC7|EIF4A3|GPS1|KPNB1|LIG3|LRRC59|MRPS7|NLE1|NME1-NME2|NOL11|NUP85|PHB|RPL23|RPS6KB1|SEPT9|SLC25A10|SPAG5|SRSF1|SUPT4H1|TEX2|TMEM97|TOP2A|TUBG1|UTP6|UTP18|ZNF207|ZNHIT3	39	3.07959382735e-11	ARFGEF1|ATP6V1H|BOP1|C6ORF48|C8ORF33|CHD7|COPS5|CYC1|E2F5|EEF1D|EIF3E|EIF3H|ENY2|EXOSC4|GINS4|HSF1|LAPTM4B|MCM4|MIR939|MRPL15|MTDH|NR1D2|PABPC4|PRKDC|PTDSS1|PTK2|PUF60|RB1CC1|RPL8|RRS1|SCRIB|SLC39A4|TBC1D31|TCEA1|TGS1|UQCRB|WDYHV1|YWHAZ|ZNF696
Ribosomal protein	0		0.000529776585618	9	0.000428255786535	MRPL10|MRPL12|MRPL27|MRPL38|MRPL45|MRPL58|MRPS7|MRPS23|RPL23	8	0.0006312973847	MRPL13|MRPL15|MRPS28|RPL7|RPL8|RPL26|RPL30|RPL37
WEI_MYCN_TARGETS_WITH_E_BOX	0		0.000116720046764	32	6.97604219088e-06	ACLY|BIRC5|CANT1|CCDC137|CDC6|DUSP14|DYNLL2|FASN|GOSR2|GRB2|HGS|HNRNPDL|KPNB1|MRPL27|MRPL58|MRPS23|NME1-NME2|NMT1|NOL11|PHB|PNPO|PRR15L|PSMD12|PSME3|RAD51C|SFXN4|SLC25A10|SLC25A39|SLC35B1|SRSF7|TMEM97|UTP18	25	0.000226464051338	ATAD2|ATP6V1C1|CCNE2|DCAF13|DSCC1|ELOC|IMPAD1|LACTB2|LAPTM4B|LYN|MCM4|MRPL15|MRPS28|MTDH|MTFR1|NDUFAF6|NUDCD1|OTUD6B|POP1|PTDSS1|RIPK2|SLC25A32|SLC52A2|TMEM70|ZFP41
cellular macromolecule catabolic process [GoID:GO:0044265; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|IPI|ISS|NAS|TAS]	0		0.000238646866324	32	0.000474568128393	ANAPC11|AP2B1|CASC3|CCDC47|CDC27|CSNK1D|DHX34|EIF4A3|KCTD2|KPNB1|MVB12B|NPLOC4|NT5C3B|PSMB3|PSMC5|PSMD3|PSMD11|PSMD12|PSME3|RMND5B|RPL23|SDF2|SMG8|SNF8|SPOP|SUMO2|TLK2|TNFAIP1|TOM1L1|UBE2Z|USP36|VPS25	34	2.72560425442e-06	AGO2|AUP1|CHMP4C|CUL5|DERL1|EIF3E|ELOC|EXOSC4|HSF1|LAPTM4B|PABPC1|PABPC4|POP1|PTK2|RNF19A|RNF139|RPL7|RPL8|RPL26|RPL30|RPL37|SCGB1A1|SDCBP|SHARPIN|SMG5|TATDN1|UBE2V2|UBE2W|UBR5|UBXN2B|VPS28|WWP1|YTHDF3|YWHAZ
large ribosomal subunit [GoID:GO:0015934; evidenceTypes:IBA|IDA|IEA|ISS|NAS|TAS]	0		0.000639582916055	7	0.000939513284252	MRPL10|MRPL12|MRPL27|MRPL38|MRPL45|MRPL58|RPL23	7	0.000339652547858	MRPL13|MRPL15|RPL7|RPL8|RPL26|RPL30|RPL37
mRNA metabolic process [GoID:GO:0016071; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	0		0.00038666457846	27	0.000225626463307	CASC3|CDK11B|DHX8|DHX34|DHX40|EFTUD2|EIF4A3|JMJD6|MED1|NSRP1|NT5C3B|PSMB3|PSMC5|PSMD3|PSMD11|PSMD12|PSME3|RBM11|RPL23|SMG8|SRSF1|SRSF7|STAT3|SUPT4H1|SUPT6H|TSEN54|ZMAT5	23	0.000547702693613	AGO2|CELF5|EIF3E|ESRP1|EXOSC4|HSF1|PABPC1|PABPC3|PABPC4|POLR2K|PUF60|RPL7|RPL8|RPL26|RPL30|RPL37|SCGB1A1|SMG5|TGS1|VIRMA|YTHDF3|YWHAZ|ZC3H3
nucleolus [GoID:GO:0005730; evidenceTypes:IBA|IDA|IEA|IMP|ISS|NAS|TAS]	0		0.000436959869899	31	0.000199814422945	AATF|ACACA|ANAPC11|BCAS3|CCDC137|COIL|DDX52|EIF4A3|FTSJ3|GRB2|JMJD6|JPT1|MED1|MIF4GD|NARF|NF1|NLE1|NOL11|RDM1|RPL23|SIRT7|SRP68|SUZ12|THAP2|TNFAIP1|TOP2A|TSEN54|USP36|UTP6|UTP18|ZNF207	26	0.000674105316853	ARFGEF1|BOP1|CHD7|CPNE3|DCAF13|DDX50|E2F5|EEF1D|EXOSC4|MAF1|MTDH|NBN|OXR1|POLR1A|POLR2K|POP1|PRKDC|RPL7|RPL26|RRS1|STAU2|TCEA1|TERF1|TGS1|UTP23|ZNF16
ribosome biogenesis [GoID:GO:0042254; evidenceTypes:EXP|IBA|IC|IDA|IEA|IMP|ISS|NAS|TAS]	0		0.000646522226803	14	0.000403604534269	AATF|CSNK1D|DDX52|EIF4A3|ERAL1|FTSJ3|MRM1|MRPL10|MRPS7|NLE1|NOL11|RPL23|UTP6|UTP18	12	0.000889439919337	BOP1|CHD7|DCAF13|EXOSC4|MTERF3|RPL7|RPL8|RPL26|RPL30|RPL37|RRS1|UTP23
